Generate 3D Locomotion Data
This module is intended to create 2D video trajectories of 3D neuron structures, e.g. microscopy images of neuron activations inside a transparent body.
TODO
- add base classes
- add animation samples
- add exporting as .npz files, e.g. projected 2d image time series and individual neuron traces
- more realistic exporting, e.g. add noises/blurring to glow, observation and video quality
- add segment rotation smoothing, e.g. interpolate rotation angles between neighboring segments
- add realistic dynamics samples, e.g. accelerations that mimic real movements, glow spiking dynamics
- use real life structural examples, e.g. code to generate real worm neuron positions and mimic worm movements
- restructure base classes -> move positions/connections to segments rather than bones (or not!?)
