napari-crop
Crop regions in napari manually
Usage
Create a new shapes layer to annotate the region you would like to crop:
Use the rectangle tool to annotate a region. Start the crop
tool from the Tools > Utilities > Crop region
menu.
Click the Run
button to crop the region.
You can also use the Select shapes
tool to move the rectangle to a new place and crop another region by clicking on Run
.
Hint: You can also use the napari-tabu plugin to send all your cropped images to a new napari window.
This napari plugin was generated with Cookiecutter using with @napari‘s cookiecutter-napari-plugin template.
Installation
You can install napari-crop
via pip:
pip install napari-crop
Contributing
Contributions are very welcome.
License
Distributed under the terms of the BSD-3 license,
“napari-crop” is free and open source software
Issues
If you encounter any problems, please create a thread on image.sc along with a detailed description and tag @haesleinhuepf.