Crop regions in napari manually
Create a new shapes layer to annotate the region you would like to crop:
Use the rectangle tool to annotate a region. Start the
crop tool from the
Tools > Utilities > Crop region menu.
Run button to crop the region.
You can also use the
Select shapes tool to move the rectangle to a new place and crop another region by clicking on
Hint: You can also use the napari-tabu plugin to send all your cropped images to a new napari window.
You can install
napari-crop via pip:
pip install napari-crop
Contributions are very welcome.
Distributed under the terms of the BSD-3 license,
“napari-crop” is free and open source software