tiedpyranges

Extends the pyranges module with operations on joined genomic intervals (e.g. exons of same transcript)

Install with:

pip install tiedpyranges

or

conda install -c mmariotti tiedpyranges

Then use within python:

>>> from tiedpyranges import pyranges

The pyranges module imported will have all functions from the original pyranges (see https://pyranges.readthedocs.io/).

Additionally, you have available tiedpyranges-specific functions documented in the documentation.tar file included in github.

GitHub

GitHub - marco-mariotti/tiedpyranges: Extends the pyranges module with operations on joined genomic intervals (e.g. exons of same transcript)

Extends the pyranges module with operations on joined genomic intervals (e.g. exons of same transcript) - GitHub - marco-mariotti/tiedpyranges: Extends the pyranges module with operations on joined...

GitHubmarco-mariotti