SSA

Our implementation of Gillespie’s Stochastic Simulation Algorithm (SSA)

Requirements

  • python >=3.7
  • numpy
  • pandas
  • matplotlib
  • pyyaml

Command line usage

The main program kinetics.py can be used as below

<div class="snippet-clipboard-content position-relative overflow-auto" data-snippet-clipboard-copy-content="python kinetics.py -f “>

python kinetics.py -f