This repo stores the codes for topic modeling on palliative care journals.
Data Preparation
You first need to download the journal papers.
bash 1_download_pdfs.sh # To download papers from the journal `jpm`
bash 1_download_pdfs_jwh.sh # To download papers from the journal `jwh`
Environment Setup
Install all the necessary python packages.
bash 2_pdf2json_prep_env.sh
How to Run the Topic Model
Run the topic modeling on the default journal jpm:
python 3_pdf2json2topics.py
Or you can also run the topic modeling on the other journal jwh:
python 3_pdf2json2topics.py -journal_name jwh
