The Monod package fits CME models to sequencing data
The Monod package fits CME models to sequencing data
Generate (message) sequence diagrams from TLA+ state traces
Generate (message) sequence diagrams from TLA+ state traces
Library to play with filtering numeric sequences by sums of their pairs, triplets, etc. With a bonus CLI demo
Library to play with filtering numeric sequences by sums of their pairs, triplets, etc. With a bonus CLI demo
En- and decrypting text-messages by creating a key with of the fibonacci-sequence
En- and decrypting text-messages by creating a key with of the fibonacci-sequence
Temporal Alignment Prediction for Supervised Representation Learning and Few-Shot Sequence Classification
Temporal Alignment Prediction for Supervised Representation Learning and Few-Shot Sequence Classification
Generating the Fibonacci sequence is a classic recursive problem
Generating the Fibonacci sequence is a classic recursive problem
Minimal implementaion of Decision Transformer: Reinforcement Learning via Sequence Modeling in PyTorch for mujoco control tasks in OpenAI gym
Minimal implementaion of Decision Transformer: Reinforcement Learning via Sequence Modeling in PyTorch for mujoco control tasks in OpenAI gym
Analysis of Antarctica sequencing samples contaminated with SARS-CoV-2
Analysis of Antarctica sequencing samples contaminated with SARS-CoV-2
Doughskript interpreter for converting simple command sequences into executable Arduino C++ code
Doughskript interpreter for converting simple command sequences into executable Arduino C++ code
Iterative refinement graph neural network for antibody sequence-structure co-design (RefineGNN)
Iterative refinement graph neural network for antibody sequence-structure co-design (RefineGNN)
Simple software to calculate susequence with highest sum
Simple software to calculate susequence with highest sum
Sequential prediction learning framework and algorithm
Sequential prediction learning framework and algorithm
Linux GUI app to codon optimize many single-fasta files with coding sequences , using many taxonomy ids
Linux GUI app to codon optimize many single-fasta files with coding sequences , using many taxonomy ids
Train large COMET (T5-3B/GPT2-XL) with small memory (on 11GB memory GPUs like 1080/2080) using DeepSpeed
Train large COMET (T5-3B/GPT2-XL) with small memory (on 11GB memory GPUs like 1080/2080) using DeepSpeed
Sequitur : A Library of autoencoders for sequential data
Sequitur : A Library of autoencoders for sequential data
A machine learning project that predicted binding sites of AP1 transcription factor, using ChIP-Seq data and local DNA shape information
AP1 Transcription Factor Binding Site Prediction
A pipeline to analyse transposon directed insertion-site sequencing
A set of tools to analyse the output from TraDIS analyses
Pipeline code for Sequential-GAM(Genome Architecture Mapping)
Pipeline code for Sequential-GAM(Genome Architecture Mapping)
ParaGen - A PyTorch deep learning framework for parallel sequence generation
ParaGen - A PyTorch deep learning framework for parallel sequence generation
Use the Seq2Seq method to implement machine translation and introduce Attention mechanism to improve the results
Use the Seq2Seq method to implement machine translation and introduce Attention mechanism to improve the results
Deep learning transformer model that generates unique music sequences
Deep learning transformer model that generates unique music sequences
SCROLLS: Standardized CompaRison Over Long Language Sequences
SCROLLS: Standardized CompaRison Over Long Language Sequences
Example of a Viterbi algorithm applied to a hidden Markov model on DNA sequence
Example of a Viterbi algorithm applied to a hidden Markov model on DNA sequence
Creates a magic square by randomly generating a list until the list happens to be a magic square
Creates a magic square by randomly generating a list until the list happens to be a magic square
An easy to use GUI based video to image sequence converter (and vice versa)
An easy to use GUI based video to image sequence converter (and vice versa)
Sequence lineage information extracted from RKI sequence data repo
Sequence lineage information extracted from RKI sequence data repo
Extracts essential Mediapipe face landmarks and arranges them in a sequenced order
Extracts essential Mediapipe face landmarks and arranges them in a sequenced order
A toolkit to generate MR sequence diagrams
A toolkit to generate MR sequence diagrams
The scripts used for the project of ‘Assembly of a pan-genome for global cattle reveals missing sequence and novel structural variation
The scripts used for the project of ‘Assembly of a pan-genome for global cattle reveals missing sequence and novel structural variation
Assembly of a pan-genome for global cattle reveals missing sequence and novel structural variation, providing new insights into their diversity and evolution history
Assembly of a pan-genome for global cattle reveals missing sequence and novel structural variation, providing new insights into their diversity and evolution history
A modular sequencer based on Pi Pico & EuroPi
A modular sequencer based on Pi Pico & EuroPi
Dragmap-meth: Fast and accurate aligner for bisulfite sequencing reads using dragmap
Dragmap-meth: Fast and accurate aligner for bisulfite sequencing reads using dragmap
Annotates sequences with Eggnog-mapper and hhblits against PDB70
Annotates sequences with Eggnog-mapper and hhblits against PDB70
Annotates sequences with Eggnog-mapper and hhblits against PDB70
Annotates sequences with Eggnog-mapper and hhblits against PDB70
A minimal, standalone viewer for 3D animations stored as stop-motion sequences of individual .obj mesh files
A minimal, standalone viewer for 3D animations stored as stop-motion sequences of individual .obj mesh files
Anchor-Based Spatio-Temporal Attention 3-D Convolutional Networks for Dynamic 3-D Point Cloud Sequences
Anchor-Based Spatio-Temporal Attention 3-D Convolutional Networks for Dynamic 3-D Point Cloud Sequences
ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data
ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data
Cash in on Expressed Barcode Tags (EBTs) from NGS Sequencing Data with Python
Cash in on Expressed Barcode Tags (EBTs) from NGS Sequencing Data with Python
Simple, high-school-leveled sequence library written in Python
Simple, high-school-leveled sequence library written in Python
Big Bird: Transformers for Longer Sequences
Big Bird: Transformers for Longer Sequences
Using deep learning to predict gene structures of the coding genes in DNA sequences of Arabidopsis thalia
Using deep learning to predict gene structures of the coding genes in DNA sequences of Arabidopsis thalia
Official codebase for Decision Transformer: Reinforcement Learning via Sequence Modeling
Official codebase for Decision Transformer: Reinforcement Learning via Sequence Modeling
PyTorch trainer and model for Sequence Classification
PyTorch trainer and model for Sequence Classification
Using deep learning to predict gene structures of the coding genes in DNA sequences of Arabidopsis thaliana
Using deep learning to predict gene structures of the coding genes in DNA sequences of Arabidopsis thaliana
A functional mutable sequence inheriting from Python's built-in list
A functional mutable sequence inheriting from Python's built-in list
Tools to create pixel-wise object masks, bounding box labels and 3D object model for object sequences filmed
Tools to create pixel-wise object masks, bounding box labels and 3D object model for object sequences filmed
A PaddlePaddle implementation of Time Interval Aware Self-Attentive Sequential Recommendation
A PaddlePaddle implementation of Time Interval Aware Self-Attentive Sequential Recommendation
Statistical tests for the sequential locality of graphs
Statistical tests for the sequential locality of graphs
PRIP：A Protein-RNA Interface Predictor Based on Semantics of Sequences
PRIP：A Protein-RNA Interface Predictor Based on Semantics of Sequences
A socket script to obtain chinese phones-sequence for any english word
A socket script to obtain chinese phones-sequence for any english word